Conversation 5: Proceedings

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Structure and Expression
Volumes One, Two and Three, Hardcover 1988

The Proceedings of the Fifth Conversation held at The University-SUNY, Albany NY, June 6-10, 1987

Editors: Ramaswamy H. Sarma, Ph.D. & Mukti H. Sarma, Ph.D.

ISBN 0-940030-21-7 Volume 1;
ISBN 0-940030-22-5 Volume 2;
ISBN 0-949930-18-7 Volume 3

Structure and Expression Volume 3

The Proceedings of the Fifth Conversation held at The University-SUNY, Albany NY, June 6-10, 1987

Ramaswamy H. Sarma, Ph.D. & Mukti H. Sarma, Ph.D.

Contents Volume 3

DNA Sequence and Structure: An Introduction
Wilma K. Olson

Sequence Directed Bending and Curvature. An Overview.
M. Sundaralingam and Y. C. Sekharudu

Use of Electron Microscopy to Examine Sequence Directed DNA Bending
Jack D. Griffith,Carline H. Laundon, Carol A. Rauch, Paul T. Englund, Wang-Ting Hsieh and Robert D. Wells

Local Variations of Curvature and Flexibility Along DNA Molecules Analyzed from Electron Micrographs
Bernard Théveny, Dominique Couland, Marc Le Bret and Bernard Révet

On the Structural Origin of DNA Curvature
Stephan Diekmann and Eberhard von Kitzing

Comparison of the Physical Properties of Two Small DNA Restriction Fragments of the Same Molecular Weight but Different Electrophoretic Mobilities
Nancy C. Stellwagen

Using the Chemistry of the Hydroxyl Radical to determine Structural Details of Bent DNA
Thomas D. Tullius and Amanda M. Burkhoff

Protein Recognition of B'-(dA)n·(dT)n Sequences and Kinetoplast DNA
David A. Zarling, Stephan Diekmann and Cornelia J. Calhoun

Mu A Protein Induced Bending of Mu End DNA
Knji Adzuma and Kiyoshi Mizuuchi

Interactions Between Resolvase and the res Site: Site Specific Pairing and DNA Bending
Joseph J. Salvo and Nigel D. F. Grindley

Functional and Structural Characterization of Stable DNA Curvature in Lambda attP
John F. Thompson, Hon Fong Mark, Bettina Franz and Arthur Landy

Sequence Context of Homooligomer Tracts in Eukaryotic Genomes: Some DFNA Conformational Implications
Ruth Nussinov, Akinori Sarai, David Wang and Robert L. Jernigan

DNA Sequence Effects on Nucleosome Positioning and DNA Bending
Edward C. Uberbacher, Elizabeth Wilkinson-Singley, Joel M. Harp and Gerald J. Bunick

Bent DNA in Chromatin Versus Free Curved DNA
E. N. Trifonov and G. Mengeritsky

Mechanisms of DNA Bending in the Free State and in the Nucleosome
V. B. Zhurkin, N. B. Ulayanov and V. I. Ivanov

Junctions and Bends in Nucleic Acids: A New Theoretical Modeling Approach
Ricahrd Lavery

Sequence Dependence of DNA Conformations: Means and Fluctuations
A. Sarai, J. Mazur, R. Nussinov and R. L. Jernigan

Base Sequence Depedent Models of DNA Curvature. The Geometric Interdependence of Complimentary Residues
Wilma K. Olson, A. R. Srinivasan, Minghong Hao and Jeffrey L. Nauss

Static Persistance Length of DNA
Edward N. Trifonov, Robert K.-Z. Tan and Stephen C. Harvey

Evaluations of DNA Curvature and Torsion
M. Treger and E. Westhof

Measures of DNA Curvature
Chang-Shung Tung, Angel E. Garcia, Thomas G. Marr, Santosh K. Mitra and Christian Burks

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