Issue December 2011

category image Volume 29
No. 3 (p 424-596)
December 2011
ISSN 0739-1102

Open Access

The Effect of Thiobarbituric Acid on Tyrosinase: Inhibition Kinetics and Computational Simulation

Tyrosinase plays various roles in organisms and much research has focused on the regulation of tyrosinase activity. We studied the inhibitory effect of thiobarbituric acid (TBA) on tyrosinase. Our kinetic study showed that TBA inhibited tyrosinase in a reversible noncompetitive manner (Ki 5 14.0 ± 8.5 mM and IC50 5 8.0 ± 1.0 mM). Intrinsic and ANS-binding fluorescences studies were also performed to gain more information regarding the binding mechanism. The results showed that no tertiary structural changes were obviously observed. For further insight, we predicted the 3D structure of tyrosinase and simulated the docking between tyrosinase and TBA. The docking simulation was successful with significant scores (binding energy for AutoDock4: 25.52 kcal/mol) and suggested that TBA was located in the active site. The 11 ns molecular dynamics simulation convinced that the four HIS residues (residue numbers: 57, 90, 250, and 282) were commonly responsible for the interaction with TBA. Our results provide a new inhibition strategy that works using an antioxidant rather than targeting the copper ions within the tyrosinase active site.

Key words: Tyrosinase; Inhibition kinetics; Thiobarbituric acid; Docking simulation.

This article can be cited as:
Shang-Jun Yin, Yue-Xiu Si, Zhi-Jiang Wang, Su-Fang Wang, Sangho Oh, Sanghyuk Lee, Seon-Mi Sim, Jun-Mo Yang, Guo-Ying Qian, Jinhyuk Lee, Yong-Doo Park. The Effect of Thiobarbituric Acid on Tyrosinase: Inhibition Kinetics and Computational Simulation J. Biomol Struct Dyn 29(3)463-470(2011).

Shang-Jun Yin1
Yue-Xiu Si1
Zhi-Jiang Wang1
Su-Fang Wang1
Sangho Oh2
Sanghyuk Lee2
Seon-Mi Sim3
Jun-Mo Yang3
Guo-Ying Qian1
Jinhyuk Lee2,4*
Yong-Doo Park1,5**

1College of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo 315100, P. R. China
2Korean BioInformation Center (KOBIC), Korea Research Institute of Bioscience and Biotechnology, Daejeon 305-806, Korea
3Department of Dermatology, Sungkyunkwan University School of Medicine, Samsung Medical Center, Seoul 135-710, Korea
4Department of Bioinformatics, University of Sciences and Technology, Daejeon 205-305, Korea
5Zhejiang Provincial Key Laboratory of Applied Enzymology, Yangtze Delta Region Institute of Tsinghua University, Jiaxing 314006, P. R. China

*Phone: 82-428798530
Fax: 82-428798519
E-mail: jinhyuk@kribb.re.kr
**Phone: 86-57488222391
Fax: 86-574-88222957
E-mail: parkyd@hotmail.com

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