Issue December 2011

category image Volume 29
No. 3 (p 424-596)
December 2011
ISSN 0739-1102

Effect of the Alkaline Cations on the Stability of the Model Polynucleotide Poly(dG-dC)∙Poly(dG-dC)

When the model polynucleotide poly(dG-dC)∙poly(dG-dC) [polyGC] is titrated with a strong acid (HCl) in unbuffered aqueous solutions containing the chlorides of the alkali metals in the concentration range 0.010 M-0.600 M, two transitions in the absorbance vs. pH plots are evidenced, characterized by the constants pKa(1) and pKa(2).

The limiting values at infinite saline concentrations of these two constants, namely pKa(1) and pKa(2) obtained making use of the “one site saturation constant” equation or, in turn, of the double logarithmic plot: pKa vs. log([salt]-1), exhibit a clear dependence on the nature of the cations.

The effects of the different alkali cations on the pKa values follow the Hofmeister series. In fact, the pKa(1) and the pKa(2) values are smaller for Li+ and Na+ than for Rb+ and Cs+, with K+ at the border between the two, showing that the transitions require higher concentrations of protons to occur in the presence of high concentrations of the cosmotropic ions.

Key words: Hofmeister effect; Alkaline cations; Model polynucleotides; UV-spectroscopy.

This article can be cited as:
Marta Airoldi, Giuseppe Gennaro, Marcello Giomini, Anna Maria Giuliani, Mauro Giustini. Effect of the Alkaline Cations on the Stability of the Model Polynucleotide Poly(dG-dC)∙Poly(dG-dC) J. Biomol Struct Dyn 29(3)585-594(2011).

Marta Airoldi1
Giuseppe Gennaro1
Marcello Giomini2,3
Anna Maria Giuliani1
Mauro Giustini2,3*

1Dipartimento di Chimica “S. Cannizzaro”, Università di Palermo, Viale delle Scienze, Pad. 17, 90128 Palermo (Italy)
2Dipartimento di Chimica, Università “La Sapienza”, Piazzale Aldo Moro 5, 00185 Roma (Italy)
3Consorzio per lo Sviluppo di Sistemi a Grande Interfase (CSGI), U.O.: Università del Molise, 86100 Campobasso (Italy)

mauro.giustini@uniroma1.it

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