Issue December 2010No. 3 (289-441) December 2010 ISSN 0739-1102 Anti-Infectious Bronchitis Virus (IBV) Activity of 1,8-cineole: Effect on Nucleocapsid (N) Protein (323-330)In the present study, anti-IBV (infectious bronchitis virus) activity of 1,8-cineole was studied
by MTT assay, as well as docking and molecular dynamic (MD) simulations. The CC50 of 1,8-cineole was above 10 mM. And the maximum noncytotoxic concentration (TD0) of 1,8-cineole was determined to be 3.90 ± 0.22 mM, which was much higher than that of ribavirin
(0.78 ± 0.15 mM). 1,8-cineole could inhibit IBV with an IC50 of 0.61 mM. MTT assay showed that the inhibition of IBV by 1, 8-cineole appears to occur moderately before entering
the cell but much strongly after penetration of the virus into the cell. In silico simulations indicated that the binding site of 1,8-cineole was located at the N terminus of phosphorylated nucleocapsid (N) protein, with interaction energy equaling -40.33 kcal mol-1. The residues TyrA92, ProA134, PheA137, AspA138 and TyrA140 had important roles during the binding
process and are fully or partially conserved in various IBV strains. Based on spatial and energetic criteria, 1,8-cineole inerfered with the binding between RNA and IBV N-protein. Results presented here may suggest that 1,8-cineole possesses anti-IBV properties, and therefore is a potential source of anti-IBV ingredients for the pharmaceutical industry.
Key words: 1,8-cineole; Anti-IBV activity; MTT; Docking; Active site. Zhiwei Yang1,2,# 1Key Laboratory of Forest Plant Ecology, Ministry of Education, Northeast Forestry University, Harbin 150040, PR China Subscription is more cost effective than purchasing PDFs on-the-fly. Click here for details. |