Issue August 2007

category image Volume 25
No. 1 (p 1-118)
August 2007
ISSN 0739-110

Interaction of the Alternating Double Stranded Copolymer poly(dA-dT)·poly(dA-dT) with NiCl2 and CdCl2: Solution Behavior (p. 77-84)

The thermal denaturation of the synthetic high molecular weight double stranded polynucleotide poly(dA-dT)·poly(dA-dT) has been studied in aqueous buffered solution (Tris 1.0mM; pH 7.8±0.2) in the presence of increasing concentrations of either Ni2+ (borderline cation) or Cd2+ (soft cation) at four different constant ionic strength values (NaCl), making use of UV and circular dichroism (CD) spectroscopies. The experimental results show that the B-type double helix of the polymer is stabilized against thermal denaturation in the presence of both cations at low concentrations, relative to the systems where only NaCl is present, in the same conditions of ionic strength and pH. The effect is more pronounced for Ni2+ than for Cd2+. At higher concentrations, both cations start to destabilize the double helix, with Cd cations inducing larger variations of Tm. In many cases, when denaturation starts, interstrand cross-linking occurs with formation of aggregates that precipitate.

Key words: Model polynucleotides; Thermal denaturation; Nickel (II) and Cadmium (II) ions; Circular Dichroism; UV-spectroscopy.

Marta Airoldi1
Giuseppe Gennaro1
Marcello Giomini2,3
Anna Maria Giuliani1,*
Mauro Giustini2,3

1Dipartimento di Chimica Inorganica e Analitica ?Stanislao Cannizzaro?
Universita di Palermo - Viale delle Scienze
Pad.17, 90128, Palermo, Italy
2Dipartimento di Chimica
Universita ?La Sapienza?
Piazzale Aldo Moro 5, 00185 Roma, Italy
3Consorzio per lo Sviluppo dei Sistemi a Grande Interfase (CSGI)
U.O.: Università del Molise ? Via De Sanctis
86100 Campobasso, Italy

*denebdue@unipa.it

Purchase Downloadable Full Text PDF of Articles

Corporate User

$100.00

University/Academic User

$50.00

Subscription is more cost effective than purchasing PDFs on-the-fly.  Click here for details.