Issue October 2001

category image Volume 19
No. 2 (p 193-364)
October 2001
ISSN 0739-1102

Fluorescence-monitored Conformational Change on the 3?-end of tRNA Upon Aminoacylation (p. 285-292)

Fluorescent tRNAs species with formycine in the 3?-terminal position (tRNA-CCF) were derived from Escherichia coli tRNAVal, Thermus thermophilus tRNAAsp and Thermus thermophilus tRNAPhe. The fluorescence of formycine was used to monitor the conformational changes at the 3´-terminus of tRNA caused by aminoacylation and hydrolysis of aminoacyl residue from aminoacyl-tRNAs. An increase of about 15% in the fluorescence intensity was observed after aminoacylation of the three tRNA-CCF. This change in fluorescence amplitude that is reversed by hydrolysis of the aminoacyl residue, does not depend on the structure of the amino acid or tRNA sequence. A local conformational change at the 3´-terminal formycine probably involving a partial destacking of the base moiety in the ACCF end takes place as a consequence of aminoacylation. A structural change at the 3´-terminus of tRNA induced by attachment and detachment of the acyl residue may be important in controlling the substrate/product relationship in reactions in which tRNA participates during protein biosynthesis.

Andreas Schlosser1
Barbara Nawrot2
Norbert Grillenbeck1
Mathias Sprinzl1*

1Laboratorium fur Biochemie
Universitat Bayreuth
D-95440 Bayreuth, Germany
2Polish Academy of Sciences
Center of Molecular and Macromolecular Studies
Department of Bioorganic Chemistry
90-363 Lodz, Sienkiewicza 112, Poland
*mathias.sprinzl@uni-bayreuth.de

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