Issue February 2001

category image Volume 18
No. 4 (p 493-646)
February 2001
ISSN 0739-1102

Lipid Induced Conformation of the Tachykinin Peptide Kassinin (p. 611-626)

Both the aqueous and lipid-induced structure of Kassinin, a dodecapeptide of amphibian origin, has been studied by two-dimensional proton nuclear magnetic resonance (2D 1H-NMR) spectroscopy and distance geometry calculations. Unambiguous NMR assignments of protons have been made with the aid of correlation spectroscopy (DQF-COSY and TOCSY) experiments and nuclear Overhauser effect spectroscopy (NOESY and ROESY) experiments. The distance constraints obtained from the NMR data have been utilized in a distance geometry algorithm to generate a family of structures, which have been refined using restrained energy minimization and dynamics. These data show that, while in water Kassinin prefers to be in an extended chain conformation, in the presence of perdeuterated dodecylphosphocholine (DPC) micelles, a membrane model system, helical conformation is induced in the central core and C-terminal region (K4-M12) of the peptide. N-terminus though less defined also displays some degree of order and a possible turn structure. The conformation adopted by Kassinin in the presence of DPC micelles is consistent with the structural motif typical of neurokinin-1 selective agonists and with that reported for Eledoisin in hydrophobic environment.

R. Christy Rani Grace1
Andrew M. Lynn2
Sudha M. Cowsik2*

1Department of Physics
Indian Institute of Science
Bangalore, 560 012, India
2School of Life Sciences
Jawaharlal Nehru University
New Delhi, 110 067, India
*scowsik@hotmail.com

Purchase Downloadable Full Text PDF of Articles

Corporate User

$100.00

University/Academic User

$50.00

Subscription is more cost effective than purchasing PDFs on-the-fly.  Click here for details.