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Book of Abstracts: Albany 2007

category image Albany 2007
Conversation 15
June 19-23 2007
Showing 201 to 235 of 235 items.  Page: 1 3

Gene Duplication in the (β/α)8 Barrel and a Primitive Genetic Code

W. L. Duax, R. Huether, S. Connare, V. Pletnev, C. Weeks, T. Umland

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How protein physics shapes biological evolution

Kontantin Zeldovich, Boris Shakhnovich and , Eugene I. Shakhnovich

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On the Route from Formamide to Informational Polymers

Ernesto Di Mauro

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Structurally conserved and variant regions in protein domain superfamilies: themes emerging from evolutionary divergence

R. Sowdhamini

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Activation of Poly(ADP-ribosyl)polymerase of Isolated Rat Liver Nuclei in Internucleosomal DNA Fragmentation

Irina G. Artsruni, Karine S. Matinyan, Emil S. Gevorgyan

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Computer-Aided, Rational Design of a Potent and Selective Small Peptide Inhibitor of Cyclooxygenase 2 (Cox2)

V Rajakrishnan, V. R. Manoj, Gita Subba Rao

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In silico Prediction and Analysis of Substrate Specificity for Acyl Adenylate and Glycosyltransferase Superfamily of Enzymes

Pankaj Kamra Khurana, Rajesh S. Gokhale, Debasisa Mohanty

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Sketching A Physico-Chemical Pathway from Gene to Drug In Silico

B. Jayaram

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Beta-Sheet Folding and Fibrillation of 11-kDa Polypeptide is Completely Aggregation Driven

Natalya I. Topilina, Vladimir V. Ermolenkov, Seiichiro Higashiya, John T.Welch, Igor K. Lednev

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Aspartic and Glutamic Acids are Important for Alpha-helix Folding

Maxim Kondratiev, Artem Kabanov, Alexander Samchenko, Vladislav Komarov

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Computational Models of Chaperonin-mediated Protein Folding

George Stan, D. Thirumalai, George H. Lorimer, Bernard R. Brooks

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Discrimination of β-barrel Membrane Proteins: Comparison between Statistical Methods and Machine Learning Algorithms

M. Michael Gromiha and , Makiko Suwa,

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Disease-associated Mutations in Proteins: Is Major Conformational Change Required?

Ajay K. Pande, Jayanti Pande

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Dynamics of Lysozyme Structure Network: Probing the Process of Unfolding

Amit Ghosh, Brinda K. V., Saraswathi Vishveshwara

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Estimating the number of protein superfamilies without known structure

Mensur Dlakic

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Identification of Functional Patterns in Protein Families using Sequence Correlation Entropy

Dina Wassaf , Kenneth Marx, Ruxandra I. Dima

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Modelling carbohydrate structure and dynamics

Richard A. Bryce

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New structural classification uncovers common sequence motifs for proteins from different superfamilies

Alexander E. Kister, Khaled Baino and , Yih-Shien Chiang

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Novel Statistical Analysis and Modeling of Mechanical Unfolding of Proteins

Valeri Barsegov

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Order through Chaos: Brownian Dynamics in Protein Allostery

Tom McLeish, Rhoda Hawkins

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Probing Macromolecular Mechanics: Heterogeneity and Function

Richard Lavery, Sophie Sacquin-Mora

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Probing Pathways and Kinetic Barriers in the Mechanical Unfolding and Refolding of Proteins

Ruxandra I. Dima, Changbong Hyeon, D. Thirumalai

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Protein Thermostability Probed by Statistical Potentials: Salt Bridges Versus Hydrophobic Interactions

Benjamin Folch, Marianne Rooman, Yves Dehouck

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Stochastic Description of Enzymatic Reaction

Valeri B. Arakelyan, Emil S. Gevorgyan, Tigran S. Sukiasyan, Aram E. Gevorgyan, Anush V. Arakelyan

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Structural Study of Serpin and Its Unique Mechanism of Inhibition

Xiaojing Zheng, Yuko Tsutsui, Patrick L. Wintrode, Mark R. Chance

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Surface Side Chains Dynamics in Protein Thermostability

A. V. Kabanov, N. N. Khechinashvili

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The Importance of Location of Tryptophan Residues in Probing the Folding Pathway of Factor for Inversion Stimulation

Virginia A. Muñiz, Sarah Boswell, Derrick W. Meinhold, Tawanna Childs, Robert Osuna, Wilfredo Colón,

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What is the Statistical-thermodynamic Cost of Binding Entropy in Protein-ligand Docking and Virtual Screening? Analysis Based on the Use of 11 Scoring Functions

Anatoly M. Ruvinsky

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Fluorescent based approach for monitoring HIV-1 RNA interaction with aminoglycosides

Elvira E. Minyat, Dmitry N. Kaluzhny, Artemy D. Beniaminov

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Nucleic Acid Chaperone Activity of Retroviral Nucleocapsid Proteins

Ioulia Rouzina, My-Nuong Vo, Kristen Stewart Maynard, Margareta Cruceanu, Mark Williams, Karin Musier-Forsyth

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Structural Flexibility and Rigidity Analysis of HIV-1 gp120

Hepan Tan , A.J. Rader

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3D Structure Model for a Peptide Presenting the Immunogenic Crown of the HIV-1 GP120 V3 Loop

Alexander M. Andrianov, Vladimir B. Teif

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Computing the Invariant Structure Elements for the Principal Neutralizing Determinant of the Human Immunodeficiency Virus Type 1

Alexander M. Andrianov

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Identification and Functional Characterization of Cellular Proteins Interacting with HIV-1 Integrase and its Inhibition by Specific DNAzyme

Nirpendra Singh, Ramesh Chandra, Vibha Tandon

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The HIV-1 V3 Loop Gives Rise to the Similar Secondary Structures in the HIV-RF and HIV-Thailand Isolates

Alexander M. Andrianov

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Showing 201 to 235 of 235 items.  Page: 1 3