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Mendel-Brno 2000

category image Volume: 17
Issue Number 6, Part 2
June 2000

The Drive for Knowledge and Creativity in G. Mendel?s Research

Vitezslav Orel

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The Structure and Function of Polycomb-Group (PC-G) Protein Transcriptional Silencing Complexes in Drosophila

D. J. Arndt-Jovin, P. Buchenau, and L. Trieschmann

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DDP1, a Multi KH-Domain Protein of Drosophila, Associates to Pericentromeric Heterochromatin.

A. Cortes, D. Huertas, L. Fanti, S. Pimpinelli, F.X. Marsellach, B. Pina and F.Azorin

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Higher Order Chromatin Structure of Human Granulocytes

Eva Bártová, Pavla Jirsová, Stanislav Kozubek, Michal Kozubek, Emilie Lukásová, Magdalena Skalníková, Alena Cafourková, Katerina Buchnícková

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SFM Observations of Living Cells

G. Bischoff, D. Riemann R. Bischoff,, J. Langner S. Hoffmann

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Micronuclei Formation of Polynucleotides by Drug Influence

G. Bischoff, R. Bischoff, S. Hoffmann

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Porphyrin Self-Assembly as Template for RNA?

G. Bischoff, S. Hoffmann

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Stabilization of Homologous d(A)·d(T)-Tracts by Paclitaxel

G. Bischoff, U. Gromann, R. Bischoff, S. Hoffmann

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Analysis of Mismatch Repair on the Genetic Stability of (CTGoCAG) Triplet Repeats in Escherichia coli

R. Bowater, P. Parniewski, A. Jaworski, & R. D. Wells

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DNA Biosensors for Enviromental and Clinical Analysis

M. Buckova, J. Labuda, M. Vanickova and M. Fuknova

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Affinity Isolation of Activated Endogenous p53 from UV Irradiated Cultured Cells

Jiri Buzek and Marikki Laiho

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Electron and Scanning Force Microscopy of Supercoiled DNA Molecules

Dmitry I. Cherny and Thomas M. Jovin

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DNA Bending, Sugar Puckering and Protein-DNA Interactions

Shantaram Kamath, Mukti H. Sarma, Michael Tosltorukov, Victor Zhurkin, Chris Turner, and Ramaswamy H. Sarma.

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Electron and Scanning Force Microscopy of Interactions of Full Length p53 and its Core Binding Domain with Linear and Supercoiled DNA

D. Cherny, S. Jett, V.Subramaniam, E. Palecek and T. Jovin

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Molecular Methods of Identification of Wheat Varieties

Andrzej Czaplicki, Piotr Borsuk, Ireneusz Moraczewski

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A Theoretical Study of Pyrimidine Photohydrates and a Proposed Mechanism for the Mutagenic Effect of Ultraviolet Light

V. I. Danilov, J. J. P. Stewart, A. Les, and J. L. Alderfer

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Recognition and Distortion of DNA Structure by Junction-Resolving Enzymes; Importance in Ensuring Productive Resolution.

Anne-Cecile Declais, Jonathan Fogg, Jonathan Hadden, Maire Convery, Simon EV Phillips and David MJ Lilley.

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Interaction of Anticancer Drug, Epirubicin with DNA

Arzum Erdem and Mehmet Ozsoz

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Padlock Oligoucleotides for Duplex DNA based on sequence specific triple helix formation

Christophe Escude, Thibaut Roulon, Therese Garestier and Claude Helene.

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Interactions between PML Nuclear Bodies and Nuclear DNA Helicase II

Fuchsova B., Novak P, Kafkova J, Hozak P

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Telomere-binding Proteins from Nuclei of Telmerase-negative Tissues Inhibit Plant Telomerase

J. Fulneckova and Jiri Fajkus

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Multi-dimensional Visualization of Genetic Information: From DNA to Genome

Fukui K.

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Charge Hopping through DNA

Bernd Giese

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A Complex between p53 Protein and DNA-Polymerase Alpha-Primase Displayed 3`-5` Exonuclease Activity

C. Melle, A. Mohrdieck, H. Förster, H.-P. Nasheuer and F. Grosse

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Structural Organisation of the Interphase Genome

Ronald Hancock

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Structural features of TBP/TATA-box Interaction

Tali. E. Haran, Avital Bareket-Samish and Ilana Cohen

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Insights into Structure/Function Relationships in the p53 Tumor Suppressor from Chemical Probes Studies and Atomic Force Microscopy Imaging

P. Balagurumoorthy, Luda S. Shlyakhtenko, Stuart M. Lindsay and Rodney E. Harrington

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Structure and Stability of Cytidine Adlayers on Au(111), Carbon Electrodes with thin Film of Mercury (MFE) and Hg Electrode

Stanislav Hason a Vladimir Vetterl

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Alignment-caused Insulator to Semiconductor Transition in Solid-phase DNA Duplexes and its Possible Biological Function.

Adam Heller

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Structural, Functional and Evolutionary Roles of Major Motifs in DNA Sequences

J. S. Heslop-Harrison

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Modern Computtional Studies of Interactions of Nucleic acid bases, their influence on the structure and dynamics of nucleic acids

J. Sponer and P. Hobza

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An Oxidant Responsive Signaling Cascade that Regulates p53-p300 Complex Formation

Ted Hupp, Gloria Luciani, Ashley Craig and David Dornan

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Dynamic Features of the Pollen Chromatin

B. Janousek, S. Matsunaga and B. Vyskot

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Postreplicative Mismatch Repair and its Malfunction in Hereditary Colon Cancer

Patrick Dufner, Ingram Iaccarino, Giancarlo Marra, Minna Nyström-Lahti, Claudia Perrera, Markus Räschle and Josef Jiricny

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Nuclear localization of selected centromeres and genes in irradiated leukemic cells

P. Jirsová, E. Bártová, S. Kozubek, M. Kozubek, E. Lukásová, A. Cafourková, E. A. Krasavin, R. D. Govorun, M. Skalníková, K. Buchnícková

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Methylene Blue as a Novel Electrochemical Hybridization Indicator for DNA Biosensor

Arzum Erdem, Kagan Kerman, Burcu Meric, Dilsat Ozkan and Mehmet Ozsoz

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Transactivation of the mdm2-gene by p53 is Regulated by DNA Topology

Ella Kim and Wolfgang Deppert

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Structure of a RNA/DNA Hybrid of the Polypurine Tract OF HIV-1

M.L. Kopka, G.W. Han, L. Lavelle, and R.E. Dickerson

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Sequence Determinants of DNA Structure and the Mechanism of DNA Structure Recognition by 434 Repressor

Gerald B. Koudelka, Steven Mauro, David R. Pawlowski, Mihai Ciubotaru,

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Dynamics of Nuclear Envelope Assembly Induced by Hypotonic Shock

Kurchashova S. Yu., Gulak P.V., Kireyev I.I., Hozak P., Poliakov V. Yu

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Inhibition of Tobacco DNA Methyltransferase in vivo Causes Unequal Hypomethylation of DNA Repeated Sequences

Kovarik, A., Koukalova, B., Lim, Y.K., Matyasek, R., Lichtenstein, C.P., Leitch, A.R. and Bezdek, M.

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Higher-Order Chromatin Organisation in Cell Nuclei: Structure and Function

S. Kozubek, E. Lukásová, E. Bártová, M. Kozubek, M. Skálníková, P. Jirsová, I. Koutná

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Control of p53 in the DNA Damage Response

David Lane, Carol Bindon, Dimitris Xirodimas, Christine Blattner, Carol Midgley, Mark Saville, Alison Sparks, Sonia Lain, Joana Desterro, Manuel Rodriguez and Ron Hay

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Genome Evolution, Polyploidy and Gene Conversion in Nicotiana

A.R. Leitch, Y.K. Lim, C.P Lichtenstein, R. Matyasek, J. Fulnecek, M. Bezdek, A. Kovarik,

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Frequences of Chromosomal Exchanges Induced with Ionising Radiation Reflect Chromosome Arrangement in the Cell Nucleus

Lukasova E, Kozubek S, Kozubek M, Cafourkova A, Koutna I, Skalnikova M,Bártová E, Jirsová P

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Targeting Recombination to Enhance Radiation Therapy

Geoff Margison, Spenser Collis, Anthony Tighe, Brian Marples, Simon Scott, Simon Scott, Linda Lashford, Anthony Howell, Robin Hunter, Jolyon Hendry

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Multinuclear Quadrupolar NMR Study of Isotropic and Anisotropic Na-DNA Aqueous Solutions

F. Cesare Marincola, M. Casu, G. Saba and A. Lai

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Two Families of 5S rDNA in Allotetraploid N. tabacum

R. Matyasek, K.Y. Lim, J. Fulnecek, A.R. Leitch, and A. Kovarik

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Replication and Expansion of Trinucleotide DNA Repeats

Sergei M. Mirkin

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Mechanism of Migration of DNA and Protein-DNA Complexes in Gel and in Free Solution

Udayan Mohanty

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Stability Studies of p53 Tumour Suppressor Mutants

Panka V. Nikolova, Kam-Bo Wong, Brian Dedecker, Julia Henckel and Alan. R. Fersht

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Cross-Talk between p53-dependent and p53-independent Apoptotic Pathways

Varda Rotter

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Rat Nuclear Proteins That Recognize DNA Damaged by N-acetoxy acetylaminofluorene

Monika Pietrowska, Joanna Lanuszewska, Joanna Rzeszowska-Wolny and Piotr Widlak

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Specific Metal Ion Binding Sites in a Model of the P4-P6 Triple Helical Domain of a Group 1 Intron

K. Sandström, M. Lindqvist, R. Strömberg and A. Gräslund

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Development of a Molecular Diagnosis Assay Based on Electrohybridization at Plastic Electrodes and Subsequent PCR

J. Schülein, B.Grassl, J.Krause, J.Hassmann, P.Müller, W.M.Bertling

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Telomeric dG(GT)4 G Sequence can Adopt Parallel-Stranded Double Helical Conformation

A. K. Shchyolkina, O. F. Borisova, M. A. Livshits, R. Klement, and T. M. Jovin

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Telomerase Activity, Expression and Telomere in situ Analysis in the Course of Treatment of Childhood Leukemias

J. Malaska, M. Sklenickova, K. Krejci,M. Bajer, H. Hrstkova, L. Fajkusova, and J. Fajkus,

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Factors Affecting Nuclear Dynamics and Green Fluorescent Protein Targeting to the Nucleus in Arabidopsis thaliana Roots

Elwira Sliwinska, Georgina Lambert and David Galbraith

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The Role and Functional Structure of 5R Rye Chromosome in Regulation of Meiosis in Wheat - Rye Amphitetraploids

W. Sodkiewicz

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Duplications of DNA in 5 and 6 Barley Chromosomes and its Influence on Plant Reproduction

T. Sodkiewicz, W. Sodkiewicz, A. Hagberg

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DNA and Chromatin Structure of Telomere-Subtelomere Junctions inSilene latifolia

E. Sykorova, M. Horakova, I. Mikako, K. Fukui, and J. Fajkus

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Parallel Structures Formed by T,C-rich Sequences. psDNA-MvaI Endonuclease Interactions

Frederic Geinguenaud, Jean Liquier, Maxim G. Brevnov, Olga V. Petrauskene, Yakov, Alexeev, Elizaveta S. Gromova , Eliane Taillandier

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Phosphorylation of Ser46 Regulates Apoptosis-inducing Ability of p53

Tomoaki Tanaka, Katsuyuki Tamai, Hirofumi Arakawa,, Yusuke Nakamura, and Yoichi Taya

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Cyclic Voltammetry of DNA-mitomycin C Adducts: Comparison of Chemical Reductive Activation of Mitomycin C with other Activation Paths

C. Teijeiro, A. Di Marino, P. Pérez and D. Marin

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Origin and Evolution of the Triplet Code

E. N. Trifonov

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Solution Studies of cis-[Pt(NH3)2Cl2] Adducts of d(CCTG*G*TCC) .d(GGACCAGG) by Vibrational Circular Dichroism Spectroscopy

D.Tsankov, B. Kalisch, J.H. van de Sande and H. Wieser

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Micronucleus Assay in Plants to Monitor Environmental Pollution In Situ

Beata Kosmider , Regina Osiecka , Jan T. Sicinski

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Mutagenic of cyanobacterial bloom in Sulejow, Jeziorsko and Wloclawek reservoirs.

Renata Kontek, Regina Osiecka, Wanda Bratkowska, Tomasz Ferenc Alina Blaszczyk, Anna Mordalska, Dobroslawa Lopaczynska, Malgorzata Tarczynska, Henryk Strozynski, Piotr Luchniak, Maciej Zalewski

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Probing DNA Conductivity by Photoinduced Electron Transfer and Scanning Probe Microscopy

Eimer Tuite, Per Lincoln, Björn Önfelt, Johan Olofsson, Donats Erts, Bengt Nordén

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Double Duplex Invasion of DNA by PNA

Eimer Tuite, Peter Nielsen, and Bengt Norden

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Detection of PNA:DNA Hybridization by Surface Plasmon Resonance-induced Fluorescence

Eimer Tuite, Malin Ardhammar, Torsten Liebermann, Thomas Neumann, Wolfgang Knoll, Peter Nielsen, and Bengt Norden

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Chemical Snapshots of DNA

T. Tullius

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Electrochemical Impedance Spectroscopy of Native and Denatured DNA

Vladimir Vetterl, , Frantisek Jelen, Viktor Drazan, Ludek Strasak, and Stanislav Hason

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Stable and Unstable Trinucleotide CTG Repeat Alleles in Myotonic Dystrophy Locus

Falk M., Silhanova E, Grochova I. and Vojtiskova, M.

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Molecular Diagnosis Cystic Fibrosis Patients from South Moravia Region

Valaskova I., Kadlecova J. Ravcukova B., Cazeneuve CHolcikova A, Gaillyova R. and Vojtiskova M.

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How the Presence of Minor Groove Amino Groups and Major Groove Methyl Groups on the Bases Affect DNA Base-pair Dynamics: Implications for Formation of A-tract Like Structures

Sebastian Wärmländer & Mikael Leijon

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Probing Effects on DNA Structure upon Interaction with Various Agents by Vibrational Circular Dichroism Spectroscopy

H. Wieser, V. Andrushchenko, M. Krasteva, V.Maharaj , A. Pandyra, D. Tsankov and J.H. van de Sande

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Role of Heteroduplex Joints in the Functional Interactions between Human Rad51 and Wild-Type p53

S. Susse, C. Janz, F. Janus, W. Deppert, and L. Wiesmuller

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DNA Unwinding in Control Regions of Yeast and E. coli.

G. Yagil

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Protein Induced DNA Bending: The Role of Phosphate Neutralisation

Raphael Gurlie and Krystyna Zakrzewska

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Unusual Nucleic Acid Structures: G-DNA, i-DNA and A-zipper. Insights from Large-scale Molecular Dynamics Simulations

Nada Spackova, Imre Berger, and Jiri Sponer

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DNA Base Amino Groups and their Role in Molecular Interactions

Jiri Sponer, Pavel Hobza

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Spliceosomal Assembly on Precursor mRNA Takes Place in the Nuclear Speckles

Ivo Melcak, Stepanka Cermanova and Ivan Raska

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Changes in Chromatin Structure during Plant Development

J. Zluvova and B. Vyskot

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Posttranslational Modification of Mutant p53 Protein in Different Tumor Cell-Lines after UV Light Damage

K. Kankova, S. Pospisilova, M. Svitakova, B. Vojtesek

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PNA-Based DNA Nanostructures

Maxim D. Frank-Kamenetskii, Heiko Kuhn and Vadim V. Demidov

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Application of Elimination Methods in Electrochemical Study of DNA

L. Trnkova, R. Kizek, O. Dracka

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The HMG1-DNA Interactions at Different Ionic Strengths and in the Presence of cis-Platin Ligands.

Alexander Polyanichko, Svetlana Davydenko, Elena Chikhirzhina and Vladimir Vorob'ev

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Osmium Tetroxide Probes of the DNA Structure. Voltammetric Microanalysis

L. Havran, M. Fojta, M. Tomschik, F. Jelen, E. Palecek

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Electrodes Modified with Biomacromolecules. Studies of DNA Interactions and DNA Damage.

M. Fojta, L. Havran, F. Jelen, T. Kubicarova, M. Tomschik and E. Palecek

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DNA Intercalation in Solution and at the Electrode Surface

Miroslav Fojta, Ludek Havran, Lucie Kovarova, Jana Fulneckova and Tatiana Kubicarova

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Supercoil-Selective Binding of Protein p53: Influence of the Protein Redox State and Roles of p53 Domains

Miroslav Fojta, Marie Brazdova, Pavlina Becvarova, Jan Palecek, Sarka Pospisilova, Borivoj Vojtesek, and Emil Palecek

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Regulation of Binding of Tumor Suppressor Protein p53 to DNA by Transition Metals

Marie Brazdova, Hana Cernocka, Sarka Postuvkova, Lenka Karlovska, Vaclav Brázda, Vinod Subramaniam, Thomas M.Jovin, and Emil Palecek

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Binding of Full Length p53 and its Core Domain to Supercoiled DNA

Marie Brazdova1, Sabina Billova1, Vaclav Brazda1, Jan Palecek1, Emil Palecek1, Vinod Subramaniam and Thomas M. Jovin

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Sequence-Specific Binding of Tumour Suppressor Protein p53 to DNA. Effect of DNA Supercoiling

E. Jagelska , L. Karlovska and E. Palecek

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Cyclic Voltammetry of Echinomycin and its Complexes with DNA

F. Jelen, A. Erdem and E. Palecek

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Peptide Nucleic Acid (PNA): Towards Gene Therapeutic Drugs

P. E. Nielsen

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The B-Z Transition Explained: A Case Study In The Electrostatics Of Nucleic Acids

M. Guéron(a), J.-Ph. Demaret(b), and M. Filoche(c)

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Recognition of DNA lesions by p53: the role of the C-terminal and core domains

Marina Protopopova, Sergey B.Zotchev, and Galina Selivanova

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CBP Is Involved In Regulation Of Differentiation Of V-Myb-Transformed Monoblasts

A. Nemajerová, J. Smarda and J. Smardová

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