Issue June 2010
Current Perspectives on Nucleosome Positioning

category image Volume 27
No. 6 (713-894)
June 2010
ISSN 0739-110

Open Access
The DNA sequence-dependence of nucleosome positioning in vivo and in vitro (713-724)

Andrew Travers1,2,, Edwige Hiriart1, Mark Churcher1, Micaela Caserta3,4, Ernesto Di Mauro3,4

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Open Access
DNA Architecture, Deformability, and Nucleosome Positioning (725-739)

Fei Xu, Wilma K. Olson

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Open Access
Nucleosome Positioning by Sequence, State of the Art and Apparent Finale (741-746)

Edward N. Trifonov

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Prediction of Nucleosome Positioning in Genomes: Limits and Perspectives of Physical and Bioinformatic Approaches (747-764)

Pasquale De Santis, Stefano Morosetti, Anita Scipioni,

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The Molecular Evolution of Nucleosome Positioning Through Sequence-Dependent Deformation of the DNA Polymer (765-780)

G. A. Babbitt, M. Y. Tolstorukov, Y. Kim

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Open Access
Nucleosome Positioning, Nucleosome Spacing and the Nucleosome Code (781-793)

David J. Clark

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Open Access
Painting a perspective on the landscape of nucleosome positioning (795-802)

Steven M. Johnson

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Open Access
A Structural Perspective on the Where, How, Why, and What of Nucleosome Positioning (803-820)

Gaurav Arya, Arijit Maitra, Sergei A. Grigoryev

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Open Access
Structure-based Analysis of DNA Sequence Patterns Guiding Nucleosome Positioning in vitro (821-841)

Feng Cui, Victor B. Zhurkin

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Sequence-dependent Kink-and-Slide Deformations of Nucleosomal DNA Facilitated by Histone Arginines Bound in the Minor Groove (843-859)

Difei Wang, Nikolai B. Ulyanov, Victor B. Zhurkin

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Electrostatic Interactions Between Arginines and the Minor Groove in the Nucleosome (861-866)

Sean M. West, Remo Rohs, Richard S. Mann, Barry Honig

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Open Access
Evaluation of Elastic Rod Models with Long Range Interactions for Predicting Nucleosome Stability (867-887)

Yuriy V. Sereda, Thomas C. Bishop

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Erratum: Bibliography in the April 2010 issue of the Journal of Biomolecular Structure and Dynamics, Volume 27, Issue Number 5

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June 2010