Issue April 2008

category image Volume 25
No. 5 (p 453-572)
April 2008
ISSN 0739-110

A Full-automatic Sequence Design Algorithm for Branched DNA Structures (p.453-466)

Jan Seiffert, Alexander Huhle

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Open Access
ISFOLD: Structure Prediction of Base Pairs in Non-Helical RNA Motifs from Isostericity Signatures in Their Sequence Alignments (p. 467-472)

Ali Mokdad, Alan D. Frankel

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Real-time Direct Observation of Single-molecule DNA Hydrolysis by Exonuclease III (p. 473-480)

Hirofumi Kurita, Ken-ichi Inaishi, Ken Torii, Madoka Urisu, Michihiko Nakano, Shinji Katsura, Akira Mizuno

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Modeling the Interactions of Herbal Drugs to β-ketoacyl ACP Synthase of Mycobacterium tuberculosis H37Rv (p. 481-494)

Ramesh K V, Mitali Purohit, Mekhala K, Mrinalini Krishnan, Kaushiki Wagle, Sudha Deshmukh

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Structural Determinants of V. cholerae CheYs that Discriminate them in FliM binding: Comparative Modeling and MD Simulation Studies (p. 495-504)

Jhimli Dasgupta, Jiban K. Dattagupta

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Conformational Characteristics of Unstructured Peptides: α-Synuclein (p. 505-516)

Jeseong Yoon, Joonho Park, Soonmin Jang, Kyunghee Lee, Seokmin Shin

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Structural Interaction Between DsrE-DsrF-DsrH Proteins Involved in the Transport of Electrons in the dsr Operon (p. 517-524)

Angshuman Bagchi, Tapash Chandra Ghosh

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Spin Label Method Reveals Barnase-Barstar Interaction: A Temperature and Viscosity Dependence Approach (p. 525-534)

V. P. Timofeev, V. V. Novikov, Ya. V. Tkachev, T. G. Balandin, A. A. Makarov, S. M. Deyev

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Computer-Aided, Rational Design of a Potent and Selective Small Peptide Inhibitor of Cyclooxygenase 2 (COX2) (p. 535-542)

V. Rajakrishnan, V. R. Manoj, Gita Subba Rao

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Molecular Modeling of the Ternary Complex of Rusticyanin-Cytochrome c4-Cytochrome Oxidase: An Insight to Possible H-Bond Mediated Recognition and Electron Transfer Reaction in T. ferrooxidans (p. 543-552)

B. P. Mukhopadhyay, B. Ghosh, H. R. Bairagya, T. K. Nandi, B. Chakrabarti, A. K. Bera

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Hydrolases: The Correlation Between Informational Structure and the Catalytic Sites Organization (p. 553-562)

Alexei N. Nekrasov, Alexei A. Zinchenko

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DFT Study of B-like Conformations of Deoxydinucleoside Monophosphates Containing Gua and/or Cyt and their Complexes with Na+ Cation (p. 563-572)

Valery I. Poltev, Victor M. Anisimov, Victor I. Danilov, Alexandra Deriabina, Eduardo Gonzalez, Agata Jurkiewicz, Andrzej Les, Nina Polteva

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